Items where Subject is "Microbiology"

2025

Campbell, B. E., Hassan, M. M., Moore, R. J., Olchowy, T., Soust, M., Al Jassim, R. and Alawneh, J. I. (2025) Temporal changes in ruminal microbiota composition and diversity in dairy cows supplemented with a lactobacilli-based DFM. Frontiers in Veterinary Science, 12 . https://doi.org/10.3389/fvets.2025.1584959

Fatima, G., Omaleki, L., Lobo, E., Kayal, A., Ambrose, R. K., Briody, T. E., Mahony, T. J. and Turni, C. (2025) Development of multiplex Luminex assays for the surveillance of antimicrobial resistance genes in nasal samples. Journal of Microbiological Methods, 237 . p. 107234. https://doi.org/10.1016/j.mimet.2025.107234

Khanom, H., Nath, C., Mshelbwala, P. P., Pasha, M. R., Magalhaes, R. S., Alawneh, J. I. and Hassan, M. M. (2025) Epidemiology and molecular characterisation of multidrug-resistant Escherichia coli isolated from chicken meat. PLOS ONE, 20 (5). e0323909. https://doi.org/10.1371/journal.pone.0323909

Loh, Z. H., Hungerford, N. L., Ouwerkerk, D., Klieve, A. V. and Fletcher, M. T. (2025) Abiotic Degradation of the Toxin Simplexin by Soil Collected from a Pimelea-Infested Paddock. Toxins, 17 (3). p. 124. https://doi.org/10.3390/toxins17030124

Monira, S., Karunarathna, K.A.N.K., Iqubal, M. E. H., Sayeed, M. A., Rahman, T., Rahman, M. K., Khan, S. A., Mshelbwala, P. P., Alawneh, J. I. and Hassan, M. M. (2025) Risk Factors for Dengue Virus Infection Among Hospitalized Patients in Bangladesh. Acta Microbiologica Hellenica, 70 (3). p. 27. https://doi.org/10.3390/amh70030027

2024

Chinivasagam, H.N., Estella, W., Finn, D., Mayer, D. G., Rodrigues, H. and Diallo, I. (2024) Broiler farming practices using new or re-used bedding, inclusive of free-range, have no impact on Campylobacter levels, species diversity, Campylobacter community profiles and Campylobacter bacteriophages. AIMS Microbiology, 10 (1). pp. 12-40. https://doi.org/10.3934/microbiol.2024002

Gilbert, R. A., Davis, C., Gravel, J. L. and Ouwerkerk, D. (2024) Genome sequence and annotation of Pyramidobacter sp. strain YE332, isolated from a cattle rumen fermentation of Leucaena leaf. Microbiology Resource Announcements, 13 (4), e0101223. https://doi.org/10.1128/mra.01012-23

Hau, E. E. R., Sly, P. D., Mikkelsen, D., Taneja, N., Penjor, K., Ryu, S., Donner, E., Mollinger, J. L., Ferreira, J. P., Schipp, M. and Soares Magalhaes, R. J. (2024) Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces. CABI Reviews, 19 (1). https://doi.org/10.1079/cabireviews.2024.0047

Ong, C. T., Blackall, P. J., Boe-Hansen, G. B., deWet, S., Hayes, B. J., Indjein, L., Korolik, V., Minchin, C. M., Nguyen, L. T., Nordin, Y., Siddle, H., Turni, C., Venus, B., Westman, M. E., Zhang, Z. and Tabor, A. E. (2024) Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 . https://doi.org/10.3389/fmicb.2024.1452564

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Webster, C., Kehoe, M., Bond, S., Rodoni, B. and Constable, F. E. (2024) 'Candidatus Phytoplasma vignae’, assigning a species description to a long-known phytoplasma occurring in northern Australia. International Journal of Systematic and Evolutionary Microbiology, 74 (8). https://doi.org/10.1099/ijsem.0.006502

Roy Chowdhury, P., Alhamami, T., Venter, H., Veltman, T., Carr, M., Mollinger, J. L., Trott, D. J. and Djordjevic, S. P. (2024) Identification and evolution of ICE-PmuST394: a novel integrative conjugative element in Pasteurella multocida ST394. Journal of Antimicrobial Chemotherapy . https://doi.org/10.1093/jac/dkae040

Tanzin, A. Z., Nath, C., Nayem, M. R. K., Sayeed, M. A., Khan, S. A., Magalhaes, R. S., Alawneh, J. I. and Hassan, M. M. (2024) Detection and Characterisation of Colistin-Resistant Escherichia coli in Broiler Meats. Microorganisms, 12 (12). p. 2535. https://doi.org/10.3390/microorganisms12122535

White, R. T., Ashcroft, M. M., Bauer, M. J., Bell, J., Butkiewicz, D., Alvarez-Fraga, L., Gibson, J. S., Kidsley, A. K., Mollinger, J. L., Peters, K. M., Phan, M.-D., Roberts, L. W., Rogers, B. A., Schembri, M. A., Trott, D. J., Turnidge, J., Forde, B. M. and Beatson, S. A. (2024) The complete genome sequence of five pre-2013 Escherichia coli sequence type (ST)1193 strains reveals insights into an emerging pathogen. Access Microbiology, 6 (10). https://doi.org/10.1099/acmi.0.000894.v3

2023

Bajagai, Y. S., Yeoh, Y. K., Li, X., Zhang, D., Dennis, P. G., Ouwerkerk, D., Dart, P. J., Klieve, A. V. and Bryden, W. L. (2023) Enhanced meat chicken productivity in response to the probiotic Bacillus amyloliquefaciens H57 is associated with the enrichment of microbial amino acid and vitamin biosynthesis pathways. Journal of Applied Microbiology, 134 (5), lxad085. https://doi.org/10.1093/jambio/lxad085

Birt, H. W. G., Pattison, A. B., Skarshewski, A., Daniells, J. W., Raghavendra, A. and Dennis, P. G. (2023) The core fungal microbiome of banana (Musa spp.). Frontiers in Microbiology, 14 , 1127779. https://doi.org/10.3389/fmicb.2023.1127779

Chen, S., Cheng, D., Liu, Z., Hassan, B. and Xu, Y. (2023) Community structure and antifungal activity of actinobacteria in a fungus‐growing termite. Ecological Entomology, 48 (2). pp. 251-262. https://doi.org/10.1111/een.13219

Gilbert, R. A. (2023) Pyramidobacter sp. strain YE332 genome sequencing. State of Queensland.

Langhorne, C., Gupta, S. D., Horsman, S., Wood, C., Wood, B. J., Barker, L., Deutscher, A., Price, R., McGowan, M. R., Humphris, M., Ranjbar, S., Henning, J. and Gibson, J. S. (2023) Bacterial culture and antimicrobial susceptibility results from bovine milk samples submitted to four veterinary diagnostic laboratories in Australia from 2015 to 2019. Frontiers in Veterinary Science, 10 , 1232048. https://doi.org/10.3389/fvets.2023.1232048

Matthews, A., Muthukumar, S. P. T., Hamill, S. D., Aitken, E. A. B. and Chen, A. (2023) Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe). Access Microbiology, 5 (9), 000605.v3. https://doi.org/10.1099/acmi.0.000605.v3

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Al-Sadi, A. M., Al-Subhi, A. M., Foissac, X., Salar, P., Cai, H., Yang, J.-Y., Davis, R., Jones, L., Rodoni, B. and Constable, F. E. (2023) The observation of taxonomic boundaries for the 16SrII and 16SrXXV phytoplasmas using genome-based delimitation. International Journal of Systematic and Evolutionary Microbiology, 73 (7). https://doi.org/10.1099/ijsem.0.005977

2022

Djitro, N., Roach, R. L., Mann, R., Campbell, P. R., Rodoni, B. and Gambley, C. (2022) Comparative genomics and genomic diversity of Pseudomonas syringae clade 2b-a in Australia. BMC Microbiology, 22 (1). p. 278. https://doi.org/10.1186/s12866-022-02678-9

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Rodoni, B. and Constable, F. E. (2022) Iodixanol density gradients as an effective phytoplasma enrichment approach to improve genome sequencing. Frontiers in Microbiology, 13 . https://doi.org/10.3389/fmicb.2022.937648

Seididamyeh, M., Netzel, M. E., Mereddy, R. and Sultanbawa, Y. (2022) Antifungal photodynamic inactivation with curcumin. In: TropAg 2022 International Agriculture Conference, 31 October - 2 November 2022, Brisbane, Australia.

Waje, A. F., Lantican, D. V., Pathania, N. and Dela Cueva, F. M. (2022) Draft Genomes of Six Philippine Erwinia mallotivora Isolates: Comparative Genomics and Genome-Wide Analysis of Candidate Secreted Proteins. Current Microbiology, 79 (6). p. 164. https://doi.org/10.1007/s00284-022-02857-x

2021

Abeynayake, S. W., Fiorito, S., Dinsdale, A., Whattam, M., Crowe, B., Sparks, K., Campbell, P. R. and Gambley, C. (2021) A Rapid and Cost-Effective Identification of Invertebrate Pests at the Borders Using MinION Sequencing of DNA Barcodes. Genes, 12 (8). https://doi.org/10.3390/genes12081138

Agnihotri, K., Oakey, J., Smith, C. S., Weir, R., Pyke, A. and Melville, L. (2021) Genome-scale molecular and phylogenetic characterization of Middle Point orbiviruses from Australia. Journal of General Virology, 102 (12). https://doi.org/10.1099/jgv.0.001685

Premaratne, A., Zhang, H., Wang, R., Chinivasagam, H.N. and Billington, C. (2021) Phage Biotechnology to Mitigate Antimicrobial Resistance in Agriculture. In: Sustainable Agriculture Reviews 49: Mitigation of Antimicrobial Resistance Vol 2. Natural and Synthetic Approaches. Springer International Publishing, Cham. https://doi.org/10.1007/978-3-030-58259-3_9

Rodrigues Jardim, B., Kinoti, W. M., Tran-Nguyen, L. T. T., Gambley, C., Rodoni, B. and Constable, F. E. (2021) ‘Candidatus Phytoplasma stylosanthis’, a novel taxon with a diverse host range in Australia, characterised using multilocus sequence analysis of 16S rRNA, secA, tuf, and rp genes. International Journal of Systematic and Evolutionary Microbiology, 71 (1). https://doi.org/10.1099/ijsem.0.004589

Sabburg, R., Gregson, A., Urquhart, A. S., Aitken, E. A. B., Smith, L., Thatcher, L. F. and Gardiner, D. M. (2021) A method for high-throughput image-based antifungal screening. Journal of Microbiological Methods, 190 . p. 106342. https://doi.org/10.1016/j.mimet.2021.106342

Sun, X., Blackall, P. J., Daniel, P., Chandra, K., Jenkin, S. and Turni, C. (2021) An improved multiplex PCR for Actinobacillus pleuropneumoniae, Glaesserella australis and Pasteurella multocida. Journal of Microbiological Methods, 191 . p. 106360. https://doi.org/10.1016/j.mimet.2021.106360

Towett-Kirui, S., Morrow, J. L., Close, S., Royer, J. E. and Riegler, M. (2021) Host-endoparasitoid-endosymbiont relationships: concealed Strepsiptera provide new twist to Wolbachia in Australian tephritid fruit flies. Environmental Microbiology, 23 (9). pp. 5587-5604. https://doi.org/10.1111/1462-2920.15715

2020

Hassan, B., Siddiqui, J. A. and Xu, Y. (2020) Vertically Transmitted Gut Bacteria and Nutrition Influence the Immunity and Fitness of Bactrocera dorsalis Larvae. Frontiers in Microbiology, 11 . https://doi.org/10.3389/fmicb.2020.596352

Madhav, M., Parry, R., Morgan, J. A.T., James, P. and Asgari, S. (2020) Wolbachia Endosymbiont of the Horn Fly (Haematobia irritans irritans): a Supergroup A Strain with Multiple Horizontally Acquired Cytoplasmic Incompatibility Genes. Applied and Environmental Microbiology, 86 (6). e02589-19. https://doi.org/10.1128/AEM.02589-19

Madhav, M., Brown, G. W., Morgan, J. A.T., Asgari, S., McGraw, E. A., Munderloh, U. G., Kurtti, T. J. and James, P. (2020) Wolbachia successfully replicate in a newly established horn fly, Haematobia irritans irritans (L.) (Diptera: Muscidae) cell line. Pest Management Science, 76 (7). pp. 2441-2452. https://doi.org/10.1002/ps.5785

Olukomaiya, O. O., Adiamo, O. Q., Fernando, W. C., Mereddy, R., Li, X. and Sultanbawa, Y. (2020) Effect of solid-state fermentation on proximate composition, anti-nutritional factor, microbiological and functional properties of lupin flour. Food Chemistry, 315 . p. 126238. https://doi.org/10.1016/j.foodchem.2020.126238

2019

Burgess, T. I., Tan, Y. P., Garnas, J., Edwards, J., Scarlett, K. A., Shuttleworth, L. A., Daniel, R., Dann, E. K., Parkinson, L. E., Dinh, Q., Shivas, R. G. and Jami, F. (2019) Current status of the Botryosphaeriaceae in Australia. Australasian Plant Pathology, 48 (1). pp. 35-44. https://doi.org/10.1007/s13313-018-0577-5

Poudel, B., McLean, M.S., Platz, G.J., McIlroy, J. A., Sutherland, M.W. and Martin, A. (2019) Investigating hybridisation between the forms of Pyrenophora teres based on Australian barley field experiments and cultural collections. European Journal of Plant Pathology, 153 (2). pp. 465-473. https://doi.org/10.1007/s10658-018-1574-9

2018

Chen, W., Zuo, H., Rolfe, B., Schembri, M. A., Cobbold, R. N., Mahony, T. J., Xu, Z. P. and Zhang, B. (2018) Clay nanoparticles co-deliver three antigens to promote potent immune responses against pathogenic Escherichia coli. Journal of Controlled Release, 292 . pp. 196-209. https://doi.org/10.1016/j.jconrel.2018.11.008

McBeath, A. V., East, D. J., Wright, C. L. and Pattison, A. B. (2018) Monitoring microbial functional and structural diversity for management of disease-suppressive soils. Acta Horticulturae, 1196 . pp. 121-128. https://doi.org/10.17660/ActaHortic.2018.1196.14

Seshadri, R., Leahy, S. C., Attwood, G. T., Teh, K. H., Lambie, S. C., Cookson, A. L., Eloe-Fadrosh, E. A., Pavlopoulos, G. A., Hadjithomas, M., Varghese, N. J., Paez-Espino, D., Perry, R., Henderson, G., Creevey, C. J., Terrapon, N., Lapebie, P., Drula, E., Lombard, V., Rubin, E., Kyrpides, N. C., Henrissat, B., Woyke, T., Ivanova, N. N., Kelly, W. J., Palevic, N., Janssen, P. H., Ronimus, R. S., Noel, S., Soni, P., Reilly, K., Atherly, T., Ziemer, C., Wright, A., Ishaq, S., Cotta, S., Thompson, S., Crosley, K., McKain, S., Wallace, R. J., Flint, H. J., Martin, J. C., Forster, R. J., Gruninger, R. J., McAllister, T., Gilbert, R. A., Ouwerkerk, D., Klieve, A., Jassim, R. A., Denman, S., McSweeney, C., Rosewarne, S., Koike, S., Kobayashi, Y., Mitsumori, M., Shinkai, T., Cravero, S. and Cerón Cucchi, T. (2018) Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnology, 36 (4). pp. 359-367. https://doi.org/10.1038/nbt.4110

2017

Bowen, M. K. (2017) Estimating the efficiency of rumen microbial protein synthesis in cattle grazing tropical pastures, and implications for animal performance. In: TropAg 2017 International Tropical Agriculture Conference. High Impact Science to Nourish the world, 20-22 November 2017, Brisbane, Australia..

Chinivasagam, H.N. (2017) A “proof of concept” study to control Campylobacter using bacteriophages. Project Report. Australian Poultry CRC.

Dexter, A.F., Fletcher, N.L., Creasey, R.G., Filardo, F. F., Boehm, M.W. and Jack, K.S. (2017) Fabrication and characterization of hydrogels formed from designer coiled-coil fibril-forming peptides. RSC Advances, 7 (44). pp. 27260-27271. https://doi.org/10.1039/C7RA02811C

Vasant, B. R., Stafford, R. J., Jennison, A. V., Bennett, S. M., Bell, R. J., Doyle, C. J., Young, J. R., Vlack, S. A., Titmus, P., El Saadi, D., Jarvinen, K. A. J., Coward, P., Barrett, J. L., Staples, M., Graham, R. M. A., Smith, H. V. and Lambert, S. B. (2017) Mild Illness during Outbreak of Shiga Toxin−Producing Escherichia coli O157 Infections Associated with Agricultural Show, Australia. Emerging Infectious Diseases, 23 (10). pp. 1686-1689. https://doi.org/10.3201/eid2310.161836

2016

Kumar, A., Drozd, M., Pina-Mimbela, R., Xu, X., Helmy, Y. A., Antwi, J., Fuchs, J. R., Nislow, C., Templeton, J. M., Blackall, P. J. and Rajashekara, G. (2016) Novel Anti-Campylobacter Compounds Identified Using High Throughput Screening of a Pre-selected Enriched Small Molecules Library. Frontiers in Microbiology, 7 . https://doi.org/10.3389/fmicb.2016.00405

2015

Chinivasagam, H.N. (2015) Development of an insect model to assess phage/Campylobacter interactions. Project Report. Australian Poultry CRC.

Cowley, F.C., Barber, D. G., Houlihan, A.V. and Poppi, D. P. (2015) Immediate and residual effects of heat stress and restricted intake on milk protein and casein composition and energy metabolism. Journal of Dairy Science, 98 (4). pp. 2356-2368. https://doi.org/10.3168/jds.2014-8442

Duffy, L. L., Blackall, P. J., Cobbold, R. N. and Fegan, N. (2015) Mapping the carriage of flaA-restriction fragment length polymorphism Campylobacter genotypes on poultry carcasses through the processing chain and comparison to clinical isolates. Food Microbiology, 48 . pp. 116-122. https://doi.org/10.1016/j.fm.2014.12.009

Gilbert, R. A., Ouwerkerk, D. and Klieve, A. V. (2015) Modulation of the rumen microbiome. Microbiology Australia, 36 (1). p. 18. https://doi.org/10.1071/MA15006

Guo, S., Wakeham, D., Brouwers, H. J. M., Cobbold, R. N., Abraham, S., Mollinger, J. L., Johnson, J. R., Chapman, T. A., Gordon, D. M., Barrs, V. R. and Trott, D. J. (2015) Human-associated fluoroquinolone-resistant Escherichia coli clonal lineages, including ST354, isolated from canine feces and extraintestinal infections in Australia. Microbes and Infection, 17 (4). pp. 266-274. https://doi.org/10.1016/j.micinf.2014.12.016

Lazarus, B., Paterson, D. L., Mollinger, J. L. and Rogers, B. A. (2015) Do Human Extraintestinal Escherichia coli Infections Resistant to Expanded-Spectrum Cephalosporins Originate From Food-Producing Animals? A Systematic Review. Clinical Infectious Diseases, 60 (3). p. 439. https://doi.org/10.1093/cid/ciu785

2013

Babra, C., Tiwari, J. G., Pier, G., Thein, T. H., Sunagar, R., Sundareshan, S., Isloor, S., Hegde, N. R., deWet, S., Deighton, M., Gibson, J., Costantino, P., Wetherall, J. and Mukkur, T. (2013) The persistence of biofilm-associated antibiotic resistance of Staphylococcus aureus isolated from clinical bovine mastitis cases in Australia. Folia Microbiologica, 58 (6). pp. 469-474. https://doi.org/10.1007/s12223-013-0232-z

2012

Blackall, P. J. (2012) Food-borne pathogens - a key issue for all food animal industries. In: 12th Government Food Analysts Conference, Brisbane, Australia.

2011

Attwood, G. T., Altermann, E., Kelly, W. J., Leahy, S. C., Zhang, L. and Morrison, M. (2011) Exploring rumen methanogen genomes to identify targets for methane mitigation strategies. Animal Feed Science and Technology, 166–16 . pp. 65-75. https://doi.org/10.1016/j.anifeedsci.2011.04.004

Bala, N., Aitken, E. A. B., Fechner, N., Cusack, A. and Steadman, K. J. (2011) Evaluation of antibacterial activity of Australian basidiomycetous macrofungi using a high-throughput 96-well plate assay. Pharmaceutical Biology, 49 (5). pp. 492-500. https://doi.org/10.3109/13880209.2010.526616

Ballard, E. L., Dietzgen, R. G., Sly, L. I., Gouk, C., Horlock, C. and Fegan, M. (2011) Development of a Bio-PCR Protocol for the Detection of Xanthomonas arboricola pv. pruni. Plant Disease, 95 (9). pp. 1109-1115. https://doi.org/10.1094/PDIS-09-10-0650

Crous, P. W., Groenewald, J. Z., Shivas, R. G., Edwards, J., Seifert, K. A., Alfenas, A. C., Alfenas, R. F., Burgess, T. I., Carnegie, A. J., Hardy, G. E. S. J., Hiscock, N., Hüberli, D., Jung, T., Louis-Seize, G., Okada, G., Pereira, O. L., Stukely, M. J. C., Wang, W., White, G. P., Young, A. J., McTaggart, A. R., Pascoe, I. G., Porter, I. J. and Quaedvlieg, W. (2011) Fungal planet description sheets: 69-91. Persoonia: Molecular Phylogeny and Evolution of Fungi, 26 . pp. 108-156. https://doi.org/10.3767/003158511X581723

Crous, P. W., Summerell, B. A., Shivas, R. G., Romberg, M., Mel'nik, V. A., Verkley, G. J. M. and Groenewald, J. Z. (2011) Fungal planet description sheets: 92-106. Persoonia: Molecular Phylogeny and Evolution of Fungi, 27 . pp. 130-162. https://doi.org/10.3767/003158511X617561

Easton, D. M., Totsika, M., Allsopp, L. P., Phan, M. D., Idris, A., Wurpel, D. J., Sherlock, O., Venturini, C., Beatson, S. A., Mahony, T. J., Cobbold, R. N., Schembri, M. A. and Zhang, B. (2011) Characterization of EhaJ, a New Autotransporter Protein from Enterohemorrhagic and Enteropathogenic Escherichia coli. Frontiers in Microbiology, 2 . p. 120. https://doi.org/10.3389/fmicb.2011.00120

Hawksworth, D. L., Crous, P. W., Redhead, S. A., Reynolds, D. R., Samson, R. A., Seifert, K. A., Taylor, J. W. and Wingfield, M. J. (2011) The Amsterdam Declaration on Fungal Nomenclature. IMA Fungus, 2 (1). pp. 105-112. https://doi.org/10.5248/116.491

Nkuekam, G. K., Wilhelm de Beer, Z., Wingfield, M. J., Mohammed, C., Carnegie, A. J., Pegg, G. S. and Roux, J. (2011) Ophiostoma species (Ophiostomatales, Ascomycota), including two new taxa on eucalypts in Australia. Australian Journal of Botany, 59 (3). pp. 283-297. https://doi.org/10.1071/BT10231

Thomas, J. E. and Steele, V. (2011) First report of Panicum mosaic virus in buffalo grass (Stenotaphrum secundatum) from Australia. Australasian Plant Disease Notes, 6 (1). pp. 16-17. https://doi.org/10.1007/s13314-011-0005-y

Torok, V. A., Hughes, R. J., Mikkelsen, L. L., Perez-Maldonado, R., Balding, K., MacAlpine, R., Percy, N. J. and Ophel-Keller, K. (2011) Identification and characterization of potential performance-related gut microbiotas in broiler chickens across various feeding trials. Applied and Environmental Microbiology, 77 (17). pp. 5868-5878. https://doi.org/10.1128/AEM.00165-11

Torok, V. A., Hughes, R. J., Mikkelsen, L. L., Perez-Maldonado, R., Balding, K., MacAlpine, R., Percy, N. J. and Ophel-Keller, K. (2011) Identification and Characterization of Potential Performance-Related Gut Microbiotas in Broiler Chickens across Various Feeding Trials. Applied and Environmental Microbiology, 77 (17). pp. 5868-5878. https://doi.org/10.1128/AEM.00165-11

Tulsiani, S. M., Cobbold, R. N., Graham, G. C., Dohnt, M. F., Burns, M.‐A., Leung, L. K.‐P., Field, H. E., Smythe, L. D. and Craig, S. B. (2011) The role of fruit bats in the transmission of pathogenic leptospires in Australia. Annals of Tropical Medicine & Parasitology, 105 (1). pp. 71-84. https://doi.org/10.1179/136485911X12899838413501

2010

Gruwell, M. E., Hardy, N. B., Gullan, P. J. and Dittmar, K. (2010) Evolutionary Relationships among Primary Endosymbionts of the Mealybug Subfamily Phenacoccinae (Hemiptera: Coccoidea: Pseudococcidae). Applied and Environmental Microbiology, 76 (22). p. 7521. https://doi.org/10.1128/AEM.01354-10

Joachimsthal, E.L., Reeves, R.K.H., Hung, J., Nielsen, L. K., Ouwerkerk, D., Klieve, A. V. and Vickers, C.E. (2010) Production of bacteriocins by Streptococcus bovis strains from Australian ruminants. Journal of Applied Microbiology, 108 (2). pp. 428-436. https://doi.org/10.1111/j.1365-2672.2009.04432.x

2009

Chinivasagam, H.N. and Blackall, P. J. (2009) The re-use of water in agricultural settings. Microbiology Australia, 30 (1). pp. 38-39. https://doi.org/10.1071/MA09038

Greenhill, A.R., Shipton, W.A., Blaney, B.J., Brock, I.J., Kupz, A. and Warner, J.M. (2009) Spontaneous fermentation of traditional sago starch in Papua New Guinea. Food Microbiology, 26 (2). pp. 136-141. https://doi.org/10.1016/j.fm.2008.10.004

Joachimstal, E.L., Reeves, R.K.H., Hung, J., Nielsen, L.K., Ouwerkerk, D., Klieve, A.V. and Vickers, C.E. (2009) Production of bacteriocins by Streptococcus bovis strains from Australian ruminants. Journal of Applied Microbiology, 108 (2). pp. 428-436. https://doi.org/10.1111/j.1365-2672.2009.04432.x

Norhana, M.N. W., Azman A., M. N., Poole, S. E. and Deeth, H. C. (2009) Effects of bilimbi (Averrhoa bilimbi L.) and tamarind (Tamarindus indica L.) juice on Listeria monocytogenes Scott A and Salmonella Typhimurium ATCC 14028 and the sensory properties of raw shrimps. International Journal of Food Microbiology, 136 (1). pp. 88-94. https://doi.org/10.1016/j.ijfoodmicro.2009.09.011

Sultanbawa, Y., Cusack, A., Currie, M. and Davis, C. (2009) An innovative microplate assay to facilitate the detection of antimicrobial activity in plant extracts. Journal of Rapid Methods and Automation in Microbiology, 17 (4). pp. 519-534. https://doi.org/10.1111/j.1745-4581.2009.00187.x

2008

Chinivasagam, H.N. (2008) Re-use of chicken litter across broiler cycles – managing the food-borne pathogen risk. Project Report. AUSTRALIAN POULTRY CRC.

Chinivasagam, H.N., Gardner, E.A., Sands, J. and Blackall, P.J. (2008) The use of F-specific coliphages to assess effluent treatment and reuse schemes. Environmental Technology, 29 (5). pp. 515-524. https://doi.org/10.1080/09593330801984795

Gilbert, R. A., Denman, S. E., Padmanabha, J., Fegan, N., Al Ajmi, D. and McSweeney, C. S. (2008) Effect of diet on the concentration of complex Shiga toxin-producing Escherichia coli and EHEC virulence genes in bovine faeces, hide and carcass. International Journal of Food Microbiology, 121 (2). pp. 208-216. https://doi.org/10.1016/j.ijfoodmicro.2007.11.019

Smith, L., Smith, M. K., Tree, D. J., O'Keefe, D. and Galea, V.J. (2008) Development of a small-plant bioassay to assess banana grown from tissue culture for consistent infection by Fusarium oxysporum f. sp. cubense. Australasian Plant Pathology, 37 (2). pp. 171-179. https://doi.org/10.1071/AP08006

2007

Chinivasagam, H.N., McGahan, E. and Blackall, P.J. (2007) Food-borne pathogens and pig waste products - the spoke in the wheel? In: Eleventh Biennial Conference of the Australasian Pig Science Association (APSA), 25-28 November 2007, Brisbane.

Chinivasagam, H.N., Corney, B.G., Wright, L.L., Diallo, I.S. and Blackall, P.J. (2007) Detection of Arcobacter spp. in piggery effluent and effluent-irrigated soils in southeast Queensland. Journal of Applied Microbiology, 103 (2). pp. 418-426. https://doi.org/10.1111/j.1365-2672.2007.03275.x

Field, H.E., MacKenzie, J.S. and Daszak, P. (2007) Henipaviruses: Emerging Paramyxoviruses Associated with Fruit Bats. In: Wildlife and Emerging Zoonotic Diseases: The Biology, Circumstances and Consequences of Cross-Species Transmission. Current Topics in Microbiology and Immunology, 315 . -. https://doi.org/10.1007/978-3-540-70962-6_7

Foo, C., Farrell, J., Boxell, A., Robertson, I. and Ryan, U. M. (2007) Novel Cryptosporidium genotype in wild Australian mice (Mus domesticus). Applied and Environmental Microbiology, 73 (23). pp. 7693-7696. https://doi.org/10.1128/AEM.00848-07

Hutchings, C.L., Li, A., Fernandez, K.M., Fletcher, T., Jackson, L.A., Molloy, J.B., Jorgensen, W.K., Lim, C.T. and Cooke, B.M. (2007) New insights into the altered adhesive and mechanical properties of red blood cells parasitized by Babesia bovis. Molecular Microbiology, 65 (4). pp. 1092-1105. https://doi.org/10.1111/j.1365-2958.2007.05850.x

Shivas, R. G., Athipunyakom, P., Likhitekaraj, S., Butranu, W., Bhasabutra, T., Somrith, A., Vánky, K. and Vánky, C. (2007) An annotated checklist of smut fungi (Ustilaginomycetes) from Thailand. Australasian Plant Pathology, 36 (4). pp. 376-382. https://doi.org/10.1071/AP07036

Shivas, R. G., McTaggart, A. R. and Vánky, K. (2007) Six new smut fungi (Ustilaginomycotina) from Australia. Mycotaxon, 101 . pp. 349-360.

2006

Al-Ajmi, D., Padmanabha, J., Denman, S.E., Gilbert, R. A., Al Jassim, R.A.M. and McSweeney, C.S. (2006) Evaluation of a PCR detection method for Escherichia coli O157:H7/H– bovine faecal samples. Letters in Applied Microbiology, 42 (4). pp. 386-391. https://doi.org/10.1111/j.1472-765X.2005.01850.x

Young, A.J., Petrasovits, L.A., Croft, B.J., Gillings, M. and Brumbley, S.M. (2006) Genetic uniformity of international isolates of Leifsonia xyli subsp. xyli, causal agent of ratoon stunting disease of sugarcane. Australasian Plant Pathology, 35 . pp. 503-511. https://doi.org/10.1071/AP06055

2005

Berens, S. J., Brayton, K. A., Molloy, J. B., Bock, R. E., Lew, A. E. and McElwain, T. F. (2005) Merozoite surface antigen 2 proteins of Babesia bovis vaccine breakthrough isolates contain a unique hypervariable region composed of degenerate repeats. Infection and immunity, 73 (11). pp. 7180-7189. https://doi.org/10.1128/IAI.73.11.7180-7189.2005

Chinivasagam, H.N. and Blackall, P.J. (2005) Investigation and application of methods for enumerating heterotrophs and Escherichia coli in the air within piggery sheds. Journal of Applied Microbiology, 98 (5). pp. 1137-1145. https://doi.org/10.1111/j.1365-2672.2005.02560.x

Gilbert, R. A., Tomkins, N., Padmanabha, J., Gough, J.M., Krause, D.O. and McSweeney, C.S. (2005) Effect of finishing diets on Escherichia coli populations and prevalence of enterohaemorrhagic E. coli virulence genes in cattle faeces. Journal of Applied Microbiology, 99 (4). pp. 885-894. https://doi.org/10.1111/j.1365-2672.2005.02670.x

2002

Oakey, J., Cullen, B.R. and Owens, L. (2002) The complete nucleotide sequence of the Vibrio harveyi bacteriophage VHML. Journal of Applied Microbiology, 93 (6). pp. 1089-1098. https://doi.org/10.1046/j.1365-2672.2002.01776.x

Oakey, J., Ellis, J.T. and Gibson, L.F. (2002) The development of random DNA probes specific for Aeromonas salmonicida. Journal of Applied Microbiology, 84 (1). pp. 37-46. https://doi.org/10.1046/j.1365-2672.1997.00304.x

Ouwerkerk, D., Klieve, A. V. and Forster, R.J. (2002) Enumeration of Megasphaera elsdenii in rumen contents by real-time Taq nuclease assay. Journal of Applied Microbiology, 92 (4). pp. 753-758. https://doi.org/10.1046/j.1365-2672.2002.01580.x

2001

Stanton, J., Mundo-Ocampo, M., Baldwin, J. G. and Kaplan, D. T. (2001) Radopholus musicola n. sp., a new pathogenic species from Australia (Nematoda : Pratylenchidae). Nematology, 3 (7). pp. 689-698. https://doi.org/10.1163/156854101753536064

2000

Woods, W.G., Richards, G., Whithear, K.G., Anderson, G. R., Jorgensen, W.K. and Gasser, R.B. (2000) High-resolution electrophoretic procedures for the identification of five Eimeria species from chickens, and detection of population variation. Electrophoresis, 21 (17). pp. 3558-3563. https://doi.org/10.1002/1522-2683(200011)21:17<3558::AID-ELPS3558>3.0.CO;2-2

1999

Dommett, T.W., Bowden, R.P., Kwee, W.S., Reeves, R.K.H. and Vos, A.C. (1999) Steam and other treatment options for contaminated macadamia kernels. In: Australian Macadamia Society Conference.

Oakey, J., Gibson, L.F. and George, A.M. (1999) DNA probes specific for Aeromonas hydrophila (HG1). Journal of Applied Microbiology, 86 (2). pp. 187-193. https://doi.org/10.1046/j.1365-2672.1999.00647.x

1998

Golgh, J. M., Jorgensen, W. K. and Kemp, D. H. (1998) Development of tick gut forms of Babesia bigemina in vitro. Journal of Eukaryotic Microbiology, 45 (3). pp. 298-306. https://doi.org/10.1111/j.1550-7408.1998.tb04540.x

Oakey, J., Gibson, L. F. and George, A. M. (1998) Co-migration of RAPD-PCR amplicons fromAeromonas hydrophila. FEMS Microbiology Letters, 164 (1). pp. 35-38. https://doi.org/10.1111/j.1574-6968.1998.tb13064.x

1997

Corney, B.G., Colley, J. and Graham, G.C. (1997) Simplified analysis of pathogenic leptospiral serovars by random amplified polymorphic DNA fingerprinting. Journal of Medical Microbiology, 46 (11). pp. 927-932. https://doi.org/10.1099/00222615-46-11-927

Hugall, A., Stanton, J. and Mortiz, C. (1997) Evolution of the AT-rich mitochondrial DNA of the root knot nematode, Meloidogyne hapla. Molecular Biology and Evolution, 14 (1). pp. 40-48. https://doi.org/10.1093/oxfordjournals.molbev.a025700

Jones, S. H., Lew, A. E., Jorgensen, W. K. and Barker, S. C. (1997) Babesia bovis: Genome size, number of chromosomes and telomeric probe hybridisation. International Journal for Parasitology, 27 (12). pp. 1569-1573. https://doi.org/10.1016/S0020-7519(97)00099-4

Stanton, J., Hugall, A. and Moritz, C. (1997) Nucleotide polymorphisms and an improved PCR-based mtDNA diagnostic for parthenogenetic root-knot nematodes (Meloidogyne spp.). Fundamental and Applied Nematology, 20 (3). pp. 261-268.

1996

Cox, J.M., Story, L., Bowles, R. and Woolcock, J.B. (1996) Multilocus enzyme electrophoretic (MEE) analysis of Australian isolates of Salmonella Enteritidis. International Journal of Food Microbiology, 31 (1-3). pp. 273-282. https://doi.org/10.1016/0168-1605(96)01100-2

Hanna, J. N., Ritchie, S. A., Phillips, D. A., Shield, J., Bailey, M. C., Mackenzie, J. S., Poidinger, M., McCall, B. J. and Mills, P. J. (1996) An outbreak of Japanese encephalitis in the Torres Strait, Australia, 1995. Medical Journal of Australia, 165 (5). pp. 256-260. https://doi.org/10.5694/j.1326-5377.1996.tb124960.x

Oakey, J., Ellis, J.T. and Gibson, L.F. (1996) Differentiation of Aeromonas genomospecies using random amplified polymorphic DNA polymerase chain reaction (RAPD‐PCR). Journal of Applied Bacteriology, 80 (4). pp. 402-410. https://doi.org/10.1111/j.1365-2672.1996.tb03235.x

Swain, R. A., Nolan, J. V. and Klieve, A. V. (1996) Natural variability and diurnal fluctuations within the bacteriophage population of the rumen. Applied and Environmental Microbiology, 62 (3). pp. 994-997. https://doi.org/10.1128/aem.62.3.994-997.1996

1995

Wakman, W., Teakle, D.S., Thomas, J.E. and Dietzgen, R. G. (1995) Presence of a clostero-like virus and a bacilliform virus in pineapple plants in Australia. Australian Journal of Agricultural Research, 46 (5). pp. 947-958. https://doi.org/10.1071/AR9950947

1994

Kwee, W.S., Bowden, R.P. and Reeves, R.K.H. (1994) Effect of dry hear on bacterial flora of macadamia nuts. Technical Report. Australian Macadamia Society.

1993

Corney, B. G., Colley, J., Djordjevic, S. P., Whittington, R. and Graham, G. C. (1993) Rapid identification of some Leptospira isolates from cattle by random amplified polymorphic DNA fingerprinting. Journal of clinical microbiology, 31 (11). pp. 2927-2932. https://doi.org/10.1128/JCM.31.11.2927-2932.1993

Klieve, A. V. and Swain, R. A. (1993) Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry. Applied and Environmental Microbiology, 59 (7). pp. 2299-2303. https://doi.org/10.1128/aem.59.7.2299-2303.1993

1991

Dommett, T.W. and Kwee, W.S. (1991) Microbial changes in macadamia nuts from harvesting to processing and survival testing for key organisms. In: Annual Scientific Meeting of the Australian Society for Microbiology, July 1991, Broadbeach, Queensland.

1990

Blackall, P.J., Eaves, L. E. and Rogers, D.G. (1990) Proposal of a new serovar and altered nomenclature for Haemophilus paragallinarum in the Kume hemagglutinin scheme. Journal of Clinical Microbiology, 28 (6). pp. 1185-1187. https://doi.org/10.1128/jcm.28.6.1185-1187.1990

1985

Stirling, G.R. (1985) Host Specificity of Pasteuria Penetrans within the Genus Meloidogyne. Nematologica, 31 (2). pp. 203-209. https://doi.org/10.1163/187529285X00265

1966

Pegg, K. G. (1966) Studies on a strain of Alternaria citri Pierce, the causal organism of brown spot of Emperor mandarin. Queensland Journal of Agricultural and Animal Sciences, 23 (1). pp. 15-28.

1965

Armitt, J. and Smith, M.G. (1965) Effectiveness of a quaternary ammonium detergent-sanitizer for sanitizing milking equipment. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 357-363.

Lightbody, L. G. (1965) Bacteriological quality of some farm water supplies in Queensland. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 329-333.

Loane, P. C. (1965) Production of bacterial alpha-amylase in Queensland egg pulp. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 335-341.

Richardson, K.C. (1965) Incidence of Byssochlamys fulva in Queensland-grown canned strawberries. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 347-350.

1964

Lightbody, L. G. (1964) Effect of low-temperature storage on the bacteriological quality of pasteurized market cream. Queensland Journal of Agricultural Science, 21 (3-4). pp. 311-321.

1962

Lightbody, L. G. (1962) Coliform organisms in Queensland cheddar cheese. Queensland Journal of Agricultural Science, 19 (2). pp. 305-307.

Lightbody, L. G. and Petersen, H.P. (1962) Psychrophilic organisms in Queensland butter. Queensland Journal of Agricultural Science, 19 (3). pp. 373-384.

1961

Gillies, A. J. (1961) The value of the methylene blue dye reduction test in studying natural inhibitory properties of milk. Queensland Journal of Agricultural Sciences, 18 (1). pp. 157-159.

Lightbody, L. G. (1961) Proteolytic organisms in butter. Queensland Journal of Agricultural Science, 18 (1). pp. 109-122.

1957

Gillies, A. (1957) Inhibitory factors in cheese milk. Queensland Journal of Agricultural Science, 14 (4). pp. 233-240.

1956

McTackett, A.R. (1956) Oestral cycles and conception rates in two Trichomonas foetus infected dairy herds in Queensland. Queensland Journal of Agricultural Science, 13 (4). pp. 229-239.

Teakle, D.S. (1956) Technical notes. A lucerne root rot caused by Pythium myriotylum. Queensland Journal of Agricultural Science, 13 (4). pp. 241-243.

1955

Lightbody, L. G. (1955) Results with the Aschaffenburg-Mullen phosphatase test for pasteurized milk. Queensland Journal of Agricultural Science, 12 (4). pp. 175-178.

Smythe, V.R. and Gillies, A. (1955) The use of ultra-violet lights for the control of mould on stored cheese. Queensland Journal of Agricultural Science, 12 (4). pp. 179-184.

1946

Smythe, V.R. and Tabrett, D. (1946) A method for detecting sources of milk contamination on farms. Queensland Journal of Agricultural Science, 3 (2). pp. 103-109.

1945

Smythe, V.R. (1945) Studies on the effects of transport and storage on the bacteriological quality of raw milk. Queensland Journal of Agricultural Science, 2 (2). pp. 128-156.

Smythe, V.R. (1945) Studies on the effects of transport and storage on the bacteriological quality of raw milk. Part 2. The effect of the milk can on the methylene blue reduction time. Queensland Journal of Agricultural Science, 2 (4). pp. 244-249.