Items where Subject is "Veterinary microbiology"
Number of items at this level: 164. 2024Gilbert, R. A., Davis, C., Gravel, J. L. and Ouwerkerk, D. (2024) Genome sequence and annotation of Pyramidobacter sp. strain YE332, isolated from a cattle rumen fermentation of Leucaena leaf. Microbiology Resource Announcements, 13 (4), e0101223. Hungerford, N. L., Ouwerkerk, D., Gilbert, R. A., Loh, Z. H., Gordon, R. J., Silva, L. F. P. and Fletcher, M. T. (2024) A Feeding Trial to Investigate Strategies to Mitigate the Impacts of Pimelea Poisoning in Australian Cattle. Journal of Agricultural and Food Chemistry, 72 (28). p. 15572. ISSN 0021-8561 Kayal, A., Nahar, N., Barker, L., Tran, T., Williams, M., Blackall, P. J., Turni, C. and Omaleki, L. (2024) Molecular identification and characterisation of Mannheimia haemolytica. Veterinary Microbiology, 288 . p. 109930. ISSN 0378-1135 Ong, C. T., Blackall, P. J., Boe-Hansen, G. B., deWet, S., Hayes, B. J., Indjein, L., Korolik, V., Minchin, C. M., Nguyen, L. T., Nordin, Y., Siddle, H., Turni, C., Venus, B., Westman, M. E., Zhang, Z. and Tabor, A. E. (2024) Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 . ISSN 1664-302X Roy Chowdhury, P., Alhamami, T., Venter, H., Veltman, T., Carr, M., Mollinger, J. L., Trott, D. J. and Djordjevic, S. P. (2024) Identification and evolution of ICE-PmuST394: a novel integrative conjugative element in Pasteurella multocida ST394. Journal of Antimicrobial Chemotherapy . ISSN 0305-7453 White, R. T., Ashcroft, M. A., Bauer, M. J., Bell, J., Butkiewicz, D., Alvarez-Fraga, L., Gibson, J. S., Kidsley, A. K., Mollinger, J. L., Peters, K. M., Phan, M.-D., Roberts, L. W., Rogers, B. A., Schembri, M. A., Trott, D. J., Turnidge, J., Forde, B. M. and Beatson, S. A. (2024) The complete genome sequence of five historical Escherichia coli sequence type (ST)1193 strains reveals insights into an emerging pathogen. Access Microbiology . 2023Bajagai, Y. S., Yeoh, Y. K., Li, X., Zhang, D., Dennis, P. G., Ouwerkerk, D., Dart, P. J., Klieve, A. V. and Bryden, W. L. (2023) Enhanced meat chicken productivity in response to the probiotic Bacillus amyloliquefaciens H57 is associated with the enrichment of microbial amino acid and vitamin biosynthesis pathways. Journal of Applied Microbiology, 134 (5). ISSN 1364-5072 Hasoon, M. F., Jarocki, V. M., Mohammed, M. H., Djordjevic, S. P., Yip, H. Y. E., Carr, M., Khabiri, A., Azari, A. A., Amanollahi, R., Jozani, R. J., Carracher, B., Mollinger, J. L., Deutscher, A. T., Hemmatzadeh, F. and Trott, D. J. (2023) Antimicrobial susceptibility and molecular characteristics of Mycoplasma bovis isolated from cases of bovine respiratory disease in Australian feedlot cattle. Veterinary Microbiology, 283 . p. 109779. ISSN 0378-1135 Langhorne, C., Gupta, S. D., Horsman, S., Wood, C., Wood, B. J., Barker, L., Deutscher, A., Price, R., McGowan, M. R., Humphris, M., Ranjbar, S., Henning, J. and Gibson, J. S. (2023) Bacterial culture and antimicrobial susceptibility results from bovine milk samples submitted to four veterinary diagnostic laboratories in Australia from 2015 to 2019. Frontiers in Veterinary Science, 10 . ISSN 2297-1769 Loh, Z. H., Hungerford, N. L., Ouwerkerk, D., Klieve, A. V. and Fletcher, M. T. (2023) Identification of Acid Hydrolysis Metabolites of the Pimelea Toxin Simplexin for Targeted UPLC-MS/MS Analysis. Toxins, 15 (9). p. 551. ISSN 2072-6651 Naseem, M. N., Omaleki, L., Templeton, J. M., Muralidhar, M., Botella, J. R., Blackall, P. J. and Turni, C. (2023) Use of piggery effluent for point-of-management diagnostics: A proof of concept. Animal - science proceedings, 14 (7). pp. 820-821. ISSN 2772-283X 2022Alhamami, T., Roy Chowdhury, P., Gomes, N., Carr, M., Veltman, T., Khazandi, M., Mollinger, J. L., Deutscher, A. T., Turni, C., Mahdi, L., Venter, H., Abraham, S., Djordjevic, S. P. and Trott, D. J. (2022) Correction: Alhamami et al. First Emergence of Resistance to Macrolides and Tetracycline Identified in Mannheimia haemolytica and Pasteurella multocida Isolates from Beef Feedlots in Australia. Microorganisms 2021, 9, 1322. Microorganisms, 10 (4). ISSN 2076-2607 Ambrose, R. K., Blakebrough-Hall, C., Gravel, J. L., Gonzalez, L. A. and Mahony, T. J. (2022) Characterisation of the Upper Respiratory Tract Virome of Feedlot Cattle and its Association with Bovine Respiratory Disease. Preprints . p. 2022120438. Awawdeh, L., Turni, C., Mollinger, J. L., Henning, J., Cobbold, R. N., Trott, D. J. and Gibson, J. S. (2022) Antimicrobial susceptibility, plasmid replicon typing, phylogenetic grouping, and virulence potential of avian pathogenic and faecal Escherichia coli isolated from meat chickens in Australia. Avian Pathology . pp. 1-32. ISSN 0307-9457 Bauer, M., Ison, K. A.D. and Barber, D. G. (2022) Strategies for profitable beef production with Holstein steers. In: Australian Association of Animal Sciences 34th Biennial Conference 2022, 5–7 July 2022, Cairns, Queensland. Chinivasagam, H.N., Estella, W., Rodrigues, H., Mayer, D. G., Tran, T., Onysk, A., Weyand, C., Diallo, I. and Billington, C. (2022) Re-used or New Bedding Are Not Drivers of Salmonella Levels and Serovar Emergence in Commercially Farmed Broilers in Australia. Frontiers in Sustainable Food Systems, 6 . ISSN 2571-581X Lemin, C., English, B. H. and Rolfe, J. W. (2022) Liveweight performance of cattle grazing Redlands and Wondergraze leucaena north Queensland. In: Australian Association of Animal Sciences 34th Biennial Conference 2022, 5–7 July 2022, Cairns, Queensland. Naseem, M. N., Turni, C., Gilbert, R. A., Raza, A., Allavena, R., McGowan, M., Constantinoiu, C., Ong, C. T., Tabor, A. E. and James, P. (2022) The role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle. Veterinary Microbiology, 10 (4). ISSN 0378-1135 Ouwerkerk, D., Gauthier, E., Yuan, Y., Costa, D. F. A., Laycock, B. and Fletcher, M. T. (2022) In vivo rumen microbial degradation of polyhydroxyalkanoate biopolymers. In: Australian Association of Animal Sciences 34th Biennial Conference 2022, 5–7 July 2022, Cairns, Queensland. Roy Chowdhury, P., Alhamami, T., Venter, H., Veltman, T., Carr, M., Mollinger, J. L., Trott, D. J., Djordjevic, S. P. and Putonti, C. (2022) Complete Genome Sequence of Pasteurella multocida Sequence Type 394, Isolated from a Case of Bovine Respiratory Disease in Australia. Microbiology Resource Announcements, 11 (3). ISSN 2576-098X Sullivan, M. T., Hopkins, K., Buck, S. R., Mayne, B. and Christensen, B. (2022) Steer liveweight gain on Redlands Leucaena leucocephala (leucaena)-Urochloa decumbens (signal grass) pastures in coastal central Queensland. In: Australian Association of Animal Sciences 34th Biennial Conference 2022, 5–7 July 2022, Cairns, Queensland. Templeton, J. M., Botella, J.R. and Blackall, P. J. (2022) Are point of management assays relevant for food safety in the poultry industries? Microbiology Australia, 43 (2). pp. 67-70. ISSN 2201-9189 2021Edwards, J. E., Dagar, S. S., Kittelmann, S. and Gilbert, R. A., eds. (2021) Advances in the Understanding of the Commensal Eukaryota and Viruses of the Herbivore Gut. Frontiers in Microbiology . Frontiers Journal Series, 140 pages. ISBN 978-2-88966-674-4 Alhamami, T., Chowdhury, P. R., Gomes, N., Carr, M., Veltman, T., Khazandi, M., Mollinger, J. L., Deutscher, A. T., Turni, C., Mahdi, L., Venter, H., Abraham, S., Djordjevic, S. P. and Trott, D. J. (2021) First Emergence of Resistance to Macrolides and Tetracycline Identified in Mannheimia haemolytica and Pasteurella multocida Isolates from Beef Feedlots in Australia. Microorganisms, 9 (6). p. 1322. ISSN 2076-2607 Chinivasagam, H.N., Pepper, P.M. and Blackall, P.J. (2021) Impact of antibiotics on fluorescent Pseudomonas group and Bacillus cereus group isolated from soils exposed to effluent or waste from conventional and organic pig farming. Journal of Applied Microbiology, 130 . pp. 1130-1141. ISSN 1364-5072 Gilbert, R. A., Dagar, S. S., Kittelmann, S. and Edwards, J. E. (2021) Editorial: Advances in the Understanding of the Commensal Eukaryota and Viruses of the Herbivore Gut. Frontiers in Microbiology, 12 (392), 619287. ISSN 1664-302X Gilbert, R. A., Netzel, G., Chandra, K., Ouwerkerk, D. and Fletcher, M. T. (2021) Degradation of the Indospicine Toxin from Indigofera spicata by a Mixed Population of Rumen Bacteria. Toxins, 13 (6). ISSN 2072-6651 Ouwerkerk, D., Gilbert, R. A., Gravel, J. L., Maguire, A. J., Minchin, C. M., Hungerford, N. L., Loh, Z. H. and Fletcher, M. T. (2021) Enriching for rumen bacteria to degrade the Pimelea plant toxin simplexin, in an anaerobic in vitro fermenter. In: 33rd Australian Association of Animal Sciences Conference, 1-3 February 2021, Fremantle, Western Australia. Ouwerkerk, D., Gravel, J. L., Maguire, A. J., Minchin, C. M., Klieve, A.V. and Gilbert, R. A. (2021) Changes in mixed microbial inoculums to prevent the toxic side-effects in cattle grazing new varieties of Leucaena. In: 33rd Australian Association of Animal Sciences Conference, 1-3 February 2021, Fremantle, Western Australia. Premaratne, A., Zhang, H., Wang, R., Chinivasagam, H.N. and Billington, C. (2021) Phage Biotechnology to Mitigate Antimicrobial Resistance in Agriculture. In: Sustainable Agriculture Reviews 49: Mitigation of Antimicrobial Resistance Vol 2. Natural and Synthetic Approaches. Springer International Publishing, Cham. ISBN 978-3-030-58259-3 Turni, C., Meers, J., Parke, K., Singh, R., Yee, S., Templeton, J. M., Mone, N.K., Blackall, P. J. and Barnes, T.S. (2021) Pathogens associated with pleuritic pig lungs at an abattoir in Queensland Australia. Australian Veterinary Journal, 99 (5). pp. 163-171. ISSN 0005-0423 2020Chinivasagam, H.N., Estella, W., Cockerill, S. A., Maddock, L., Mayer, D. G., Billington, C., Premaratne, A., Liang, L., Connerton, P. L. and Connerton, I. F. (2020) Moving from concept to control; use of phages for Campylobacter reduction. Project Report. AgriFutures. Chinivasagam, H.N., Estella, W., Maddock, L., Mayer, D.G., Weyand, C., Connerton, P. L. and Connerton, I. F. (2020) Bacteriophages to Control Campylobacter in Commercially Farmed Broiler Chickens, in Australia. Frontiers in Microbiology, 11 (632). ISSN 1664-302X Dixon, R. M. and Mayer, R. J. (2020) Estimating the voluntary intake by sheep of tropical grasses from digestibility, regrowth-age and leaf content: a meta-analysis. Animal Production Science, 60 . pp. 1694-1703. Dixon, R. M., Shotton, P. and Mayer, R. J. (2020) Diets selected and growth of steers grazing buffel grass (Cenchrus ciliaris cv. Gayndah)–Centro (Centrosema brasilianum cv. Oolloo) pastures in a seasonally dry tropical environment. Animal Production Science, 60 (11). pp. 1459-1468. Gilbert, R. A. and Ouwerkerk, D. (2020) Ruminal viruses and extrachromosomal genetic elements. In: Rumen Microbiology: From Evolution to Revolution. Burleigh Dodds Series in Agricultural Science (83). Burleigh Dodds. ISBN 9781786763327 Gilbert, R. A., Townsend, E. M., Crew, K. S., Hitch, T. C. A., Friedersdorff, J. C. A., Creevey, C. J., Pope, P. B., Ouwerkerk, D. and Jameson, E. (2020) Rumen Virus Populations: Technological Advances Enhancing Current Understanding. Frontiers in Microbiology, 11 (450). ISSN 1664-302X Grant, L. J., Mikkelsen, D., Phan, A. D. T., Kang, S., Ouwerkerk, D., Klieve, A. V., Gidley, M. J. and Williams, B. A. (2020) Purified plant cell walls with adsorbed polyphenols alter porcine faecal bacterial communities during in vitro fermentation. Food & Function, 11 (1). pp. 834-845. ISSN 2042-6496 Kidsley, A. K., White, R. T., Beatson, S. A., Saputra, S., Schembri, M. A., Gordon, D., Johnson, J. R., O’Dea, M., Mollinger, J. L., Abraham, S. and Trott, D. J. (2020) Companion Animals Are Spillover Hosts of the Multidrug-Resistant Human Extraintestinal Escherichia coli Pandemic Clones ST131 and ST1193. Frontiers in Microbiology, 11 (1968). ISSN 1664-302X Loh, Z. H., Ouwerkerk, D., Klieve, A. V., Hungerford, N. L. and Fletcher, M. T. (2020) Toxin Degradation by Rumen Microorganisms: A Review. Toxins, 12 (10). ISSN 2072-6651 Mason, M. G., Blackall, P. J., Botella, J. R. and Templeton, J. M. (2020) An easy-to-perform, culture-free Campylobacter point-of-management assay for processing plant applications. Journal of Applied Microbiology, 128 (3). pp. 620-629. ISSN 1364-5072 Ooi, M. C., Goulden, E. F., Trotter, A. J., Smith, G. G. and Bridle, A. R. (2020) Aquimarina sp. Associated With a Cuticular Disease of Cultured Larval Palinurid and Scyllarid Lobsters. Frontiers in Microbiology, 11 (2395). ISSN 1664-302X 2019Awawdeh, L., Turni, C., Henning, J., Allavena, R. E., Cobbold, R. N., Mollinger, J. L. and Gibson, J. S. (2019) An Optimized Protocol for Molecular Screening of Avian Pathogenic Escherichia Coli From Broiler Chickens in South East Queensland, Australia. The Journal of Applied Poultry Research, 28 (4). pp. 1370-1381. ISSN 1056-6171 Chinivasagam, H.N. (2019) Pathogens and Piggery Effluent - An Updated Review. Project Report. Pork CRC. Chinivasagam, H.N., Estella, W., Cockerill, S. A., Maddock, L., Mayer, D. G., Billington, C., Premaratne, A., Liang, L., Connerton, P. and Connerton, I. (2019) A biocontrol option to control a foodborne pathogen, using bacteriophages to control Campylobacter in poultry. Proceedings, 36 (1). p. 162. ISSN 2504-3900 Gavey, L. (2019) Producer motivations for and against engagement in surveillance. In: 2019 Australian Biosecurity Symposium, 12-13 June 2019, Gold Coast, Australia. Gilbert, R. A. and Ouwerkerk, D. (2019) The genetics of rumen phage populations. Proceedings . ISSN 2504-3900 Gilbert, R. A., Ouwerkerk, D., Negara, W., Schatz, T., Klieve, A. and McCosker, K. D. (2019) Shifting cattle from grazing extensive pastures to floodplain pastures in the Northern Territory: Effect on rumen microbial communities. In: Proceedings of the Northern Beef Research Update Conference, 19-22 August 2019, Brisbane, Queensland, Australia. Harriott, L., Wood, C., Gentle, M., Traub, R., Perkins, N., Tozer, S. and Cobbold, R. (2019) Occurrence of bacterial pathogens and antimicrobial resistance in peri-urban wild dogs. In: 1st Queensland Pest Animal and Weed Symposium, 20-23 May 2019, Gold Coast, Australia. Hitch, T. C.A., Edwards, J. E. and Gilbert, R. A. (2019) Metatranscriptomics reveals mycoviral populations in the ovine rumen. FEMS Microbiology Letters, 366 (13). ISSN 0378-1097 Loh, Z.H., Hungerford, N.L., Ouwerkerk, D., Klieve, A.V. and Fletcher, M.T. (2019) Mitigating the Effects of the Toxin Simplexin in Pimelea Poisoning of Cattle by Development of a Microbial Probiotic. In: 4th Queensland Annual Chemistry Symposium QACS 2019, 29th November 2019, University of Queensland, Brisbane. Netzel, G., Tan, E. T. T., Yin, M., Giles, C., Yong, K. W. L., Al Jassim, R. and Fletcher, M. T. (2019) Bioaccumulation and Distribution of Indospicine and Its Foregut Metabolites in Camels Fed Indigofera spicata. Toxins (Basel), 11 (3). ISSN 2072-6651 Ouwerkerk, D., Maguire, A. J., Gravel, J. L., Minchin, C. M., Gravel, M., Klieve, A. and Gilbert, R. A. (2019) Effect of Feeding Different Cultivars of Leucaena leucocephala on Rumen-Based in vitro Anaerobic Fermentations. Proceedings, 36 (1). p. 96. ISSN 2504-3900 Rice, S. J., Baker, D. K. and Leemon, D. M. (2019) Development of mycoinsecticide formulations with Beauveria bassiana and Metarhizium anisopliae for the control of lesser mealworm, Alphitobius diaperinus, in chicken broiler houses. BioControl, 64 (5). pp. 489-500. ISSN 1573-8248 Turner, S. (2019) Veterinary laboratory user's guide. Manual. State of Queensland. Yuan, Y., Gauthier, E., Hungerford, N.L., Ouwerkerk, D., Fletcher, M.T. and Laycock, B. (2019) Modelling the controlled release of toxins in a rumen environment. In: 4th Queensland Annual Chemistry Symposium QACS 2019, 29th November 2019, University of Queensland, Brisbane. 2018Edson, D. W., Field, H., McMichael, L., Mayer, D. G., Martin, J., Welbergen, J., McLaughlin, A., Huth, L., Kristoffersen, J., Tsoukalas, G. and Kirkland, P. (2018) Hematology, plasma biochemistry, and urinalysis of free-ranging grey-headed flying foxes (Pteropus poliocephalus) in Australia. Journal of Zoo and Wildlife Medicine, 49 (3). pp. 591-598. ISSN 1042-7260 Kawasaki, M., Delamare-Deboutteville, J., Bowater, R. O., Walker, M. J., Beatson, S., Ben Zakour, N. L. and Barnes, A. C. (2018) Microevolution of Streptococcus agalactiae ST-261 from Australia indicates dissemination via imported tilapia and ongoing adaptation to marine hosts or environment. Applied and Environmental Microbiology, 84 (16), e00859-18. ISSN 00992240 (ISSN) Mukhopadhya, I., Morais, S., Laverde-Gomez, J., Sheridan, P. O., Walker, A. W., Kelly, W., Klieve, A. V., Ouwerkerk, D., Duncan, S. H., Louis, P., Koropatkin, N., Cockburn, D., Kibler, R., Cooper, P. J., Sandoval, C., Crost, E., Juge, N., Bayer, E. A. and Flint, H. J. (2018) Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii. Environmental microbiology, 20 (1). pp. 324-336. ISSN 1462-2912 Schofield, B. J., Lachner, N., Le, O. T., McNeill, D. M., Dart, P., Ouwerkerk, D., Hugenholtz, P. and Klieve, A. V. (2018) Beneficial changes in rumen bacterial community profile in sheep and dairy calves as a result of feeding the probiotic Bacillus amyloliquefaciens H57. Journal of Applied Microbiology, 124 (3). pp. 855-866. ISSN 1365-2672 Seshadri, R., Leahy, S. C., Attwood, G. T., Teh, K. H., Lambie, S. C., Cookson, A. L., Eloe-Fadrosh, E. A., Pavlopoulos, G. A., Hadjithomas, M., Varghese, N. J., Paez-Espino, D., Hungate project, c., Perry, R., Henderson, G., Creevey, C. J., Terrapon, N., Lapebie, P., Drula, E., Lombard, V., Rubin, E., Kyrpides, N. C., Henrissat, B., Woyke, T., Ivanova, N. N. and Kelly, W. J. (2018) Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnology, 36 (4). pp. 359-367. Sun, X., Kung, N., Gao, L., Liu, Y., Zhan, S., Qi, X., Wang, X., Dong, X., Jia, Z. and Morris, R. (2018) Social network analysis for poultry HPAI transmission. Transboundary and Emerging Diseases, 65 (6). pp. 1909-1919. ISSN 18651674 (ISSN) Weeks, E. N.I., Machtinger, E. T., Leemon, D. and Geden, C. J. (2018) Biological control of livestock pests: Entomopathogens. Wageningen Academic Publishers. Yee, S., Blackall, P. J. and Turni, C. (2018) Genetic diversity and toxin gene distribution among serovars of Actinobacillus pleuropneumoniae from Australian pigs. Australian Veterinary Journal, 96 (1-2). pp. 17-23. ISSN 0005-0423 2017Bowen, M. K., Poppi, D. and McLennan, S. (2017) Efficiency of rumen microbial protein synthesis in cattle grazing tropical pastures as estimated by a novel technique. Animal Production Science, 57 (8). pp. 1702-1712. ISSN 1836-5787 Gilbert, R. A., Kelly, W. J., Altermann, E., Leahy, S. C., Minchin, C. M., Ouwerkerk, D. and Klieve, A. V. (2017) Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria. Frontiers in Microbiology, 8 (2340). ISSN 1664-302X Nelson, L. J., Seeman, O. D. and Shinwari, M. W. (2017) Psorergatoides cf. kerivoulae (Acari: Psorergatidae) induces cutaneous lesions on the wings of Myotis macropus (Chiroptera: Vespertilionidae). Systematic and Applied Acarology, 22 (3). pp. 446-448. ISSN 1362-1971 2016O'Hara, P. J., Klieve, A. V., Murray, P. J., Maguire, A. J., Ouwerkerk, D. and Harper, K. (2016) Effect of time and diet change on the bacterial community structure throughout the gastrointestinal tract and in faeces of the northern brown bandicoot, Isoodon macrourus. Australian Journal of Zoology, 64 (1). p. 48. ISSN 0004-959X Schofield, B. J., Skarshewski, A., Lachner, N., Ouwerkerk, D., Klieve, A. V., Dart, P. and Hugenholtz, P. (2016) Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57. Standards in Genomic Sciences, 11 (1). pp. 1-7. ISSN 1944-3277 2015Dayao, D. A., Dawson, S., Kienzle, M. J., Gibson, J. S., Blackall, P. J. and Turni, C. (2015) Variation in the antimicrobial susceptibility of actinobacillus pleuropneumoniae isolates in a pig, within a batch of pigs, and among batches of pigs from one farm. Microbial Drug Resistance, 21 (4). pp. 491-6. ISSN 1076-6294 De Barbieri, I., Gulino, L., Hegarty, R.S., Oddy, V.H., Maguire, A., Li, L., Klieve, A.V. and Ouwerkerk, D. (2015) Production attributes of Merino sheep genetically divergent for wool growth are reflected in differing rumen microbiotas. Livestock Science, 178 . pp. 119-129. ISSN 18711413 Gilbert, R. A. and Klieve, A. V. (2015) Ruminal Viruses (Bacteriophages, Archaeaphages). In: Rumen Microbiology: From Evolution to Revolution. Springer. Gilbert, R. A., Ouwerkerk, D. and Klieve, A. V. (2015) Phage therapy in livestock methane amelioration. In: Livestock production and climate change. Cabi. ISBN 9781780644325 Gilbert, R. A., Ouwerkerk, D. and Klieve, A. V. (2015) Modulation of the rumen microbiome. Microbiology Australia, 36 (1). p. 18. ISSN 1324-4272 Guo, S., Wakeham, D., Brouwers, H. J. M., Cobbold, R. N., Abraham, S., Mollinger, J. L., Johnson, J. R., Chapman, T. A., Gordon, D. M., Barrs, V. R. and Trott, D. J. (2015) Human-associated fluoroquinolone-resistant Escherichia coli clonal lineages, including ST354, isolated from canine feces and extraintestinal infections in Australia. Microbes and Infection, 17 (4). pp. 266-274. Henderson, G., Cox, F., Ganesh, S., Jonker, A., Young, W., Janssen, P.H. and Ouwerkerk, D. (2015) Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range. Scientific Reports, 5 . p. 14567. Koya, A., de Wet, S. C., Turner, S., Cawdell-Smith, J., Venus, B., Greer, R. M., Lew-Tabor, A. E. and Boe-Hansen, G. B. (2015) Evaluation and histological examination of a Campylobacter fetus subsp. venerealis small animal infection model. Research in Veterinary Science, 99 . pp. 1-9. Morales-Erasto, V., Maruri-Esteban, E., Trujillo-Ruíz, H. H., Talavera-Rojas, M., Blackall, P. J. and Soriano-Vargas, E. (2015) Protection Conferred by Infectious Coryza Vaccines Against Emergent Avibacterium paragallinarum Serovar C-1. Avian Diseases, 59 (1). pp. 162-164. ISSN 0005-2086 Navarro, M., Stanley, R., Cusack, A. and Sultanbawa, Y. (2015) Combinations of plant-derived compounds against Campylobacter in vitro. The Journal of Applied Poultry Research, 24 (3). pp. 352-363. Tan, E.T.T., Fletcher, M. T., D'arcy, B.R. and Al Jassim, R. (2015) In vitro degradation of hepatotoxic indospicine in indigofera spicata by camel foregut fluid. In: 4th international conference of ISOCARD, 2015, Almaty Kazakhstan. 2014Barnard, R., Liang, F., Wong, L., Weis, A., Templeton, J. M. and Blackall, P. J. (2014) Genotyping of Campylobacter jejuni using a novel Polymerase-Chain-Reaction-Microsphere approach. New Biotechnology, 31, Su . S104. Dayao, D. A. E., Kienzle, M., Gibson, J. S., Blackall, P. J. and Turni, C. (2014) Use of a proposed antimicrobial susceptibility testing method for Haemophilus parasuis. Veterinary Microbiology, 172 (3-4). p. 586. ISSN 03781135 Turni, C., Singh, R., Schembri, M.A. and Blackall, P.J. (2014) Evaluation of a multiplex PCR to identify and serotypeActinobacillus pleuropneumoniaeserovars 1, 5, 7, 12 and 15. Letters in Applied Microbiology, 59 (4). pp. 362-369. ISSN 02668254 2013Gulino, L. M., Ouwerkerk, D., Kang, A. Y. H., Maguire, A. J., Kienzle, M. and Klieve, A. V. (2013) Shedding Light on the Microbial Community of the Macropod Foregut Using 454-Amplicon Pyrosequencing. Plos One, 8 (4). ISSN 1932-6203 Harper, K., Costa, D., Gulino, L.-M., Klieve, A., McLennan, S., Quigley, S. and Poppi, D. (2013) The association between liveweight gain and rumen microbial diversity in cattle. In: Northern Beef Research Update Conference 2013, Cairns, Australia. 2012Blackall, P.J. (2012) Veterinary Microbiology - Brave New Worlds and Forgotten Frontiers. In: Annual Scientific Meeting of the Australian Society for Microbiology, Brisbane / Brisbane Convention Centre. Cooper, A., Goullet, M., Mitchell, J., Ketheesan, N. and Govan, B. (2012) Serological evidence of Coxiella burnetii exposure in native marsupials and introduced animals in Queensland, Australia. Epidemiology and Infection, 140 (7). pp. 1304-1308. ISSN 0950-2688 Eigeland, K. A., Lanyon, J. M., Trott, D. J., Ouwerkerk, D., Blanshard, W., Milinovich, G. J., Gulino, L. M., Martinez, E., Merson, S. and Klieve, A. V. (2012) Bacterial Community Structure in the Hindgut of Wild and Captive Dugongs (Dugong dugon). Aquatic Mammals, 38 (4). pp. 402-411. ISSN 0167-5427 Klieve, A. V., Ouwerkerk, D. and Maguire, A. J. (2012) Archaea in the foregut of macropod marsupials: PCR and amplicon sequence-based observations. Journal of Applied Microbiology, 113 (5). pp. 1065-1075. ISSN 1364-5072 Leemon, D. M. and Jonsson, N.N. (2012) Comparative studies on the invasion of cattle ticks (Rhipicephalus (Boophilus) microplus) and sheep blowflies (Lucilia cuprina) by Metarhizium anisopliae (Sorokin). Journal of Invertebrate Pathology, 109 (2). pp. 248-259. Millard, C. M., Balano, J. C.F., Chan, C., Yuen, B., Aviles, F., Landos, M., Chong, R. S.M., Benedict, S. and Barnes, A. C. (2012) Evolution of the capsular Operon of Streptococcus iniae in response to vaccination. Applied and Environmental Microbiology, 78 (23). pp. 8219-8226. ISSN 0099-2240 Platell, J.L., Johnson, J.R., Cobbold, R.N. and Trott, D.J. (2012) Multidrug-resistant extraintestinal pathogenic Escherichia coli of sequence type ST131 in animals and foods. Veterinary Microbiology, 153 (1-2). pp. 99-108. 2011Bisgaard, M., Blackall, P. and Christensen, H. (2011) Pasteurellaceae from kangaroos form a diverse but separate phylogenetic line. In: International Pasteurellaceae Conference 2011, Elsinore, Denmark. Ouwerkerk, D., Gilbert, R. A. and Klieve, A. (2011) Archaeaphage therapy to control rumen methanogens. Project Report. Meat & Livestock Australia Limited. Platell, J. L., Johnson, J. R., Cobbold, R. N. and Trott, D. J. (2011) Multidrug-resistant extraintestinal pathogenic Escherichia coli of sequence type ST131 in animals and foods. Veterinary Microbiology, 153 (1-2). pp. 99-108. ISSN 0378-1135 Torok, V. A., Hughes, R. J., Mikkelsen, L. L., Perez-Maldonado, R., Balding, K., MacAlpine, R., Percy, N. J. and Ophel-Keller, K. (2011) Identification and Characterization of Potential Performance-Related Gut Microbiotas in Broiler Chickens across Various Feeding Trials. Applied and Environmental Microbiology, 77 (17). pp. 5868-5878. 2010Chinivasagam, H.N., Redding, M., Runge, G. and Blackall, P.J. (2010) Presence and incidence of food-borne pathogens in Australian chicken litter. British Poultry Science, 51 (3). pp. 311-318. Joachimsthal, E.L., Reeves, R.K.H., Hung, J., Nielsen, L. K., Ouwerkerk, D., Klieve, A. V. and Vickers, C.E. (2010) Production of bacteriocins by Streptococcus bovis strains from Australian ruminants. Journal of Applied Microbiology, 108 (2). pp. 428-436. ISSN 13645072 (ISSN) Milinovich, G. J., Klieve, A. V., Pollitt, C. C. and Trott, D. J. (2010) Microbial Events in the Hindgut During Carbohydrate-induced Equine Laminitis. Veterinary Clinics of North America-Equine Practice, 26 (1). 79-+. ISSN 0749-0739 Smith, C. S., de Jong, C. and Field, H. (2010) Sampling small quantities of blood from microbats. Acta Chiropterologica, 12 (1). pp. 255-258. ISSN 1508-1109 Turni, C. and Blackall, P.J. (2010) Serovar profiling of Haemophilus parasuis on Australian farms by sampling live pigs. Australian Veterinary Journal, 88 (7). pp. 255-259. ISSN 0005-0423 Turni, C., Pyke, M. and Blackall, P.J. (2010) Validation of a real-time PCR forHaemophilus parasuis. Journal of Applied Microbiology, 108 (4). pp. 1323-1331. ISSN 13645072 2009Kurscheid, S., Lew-Tabor, A. E., Rodriguez Valle, M., Bruyeres, A. G., Doogan, V. J., Munderloh, U. G., Guerrero, F. D., Barrero, R. A. and Bellgard, M. I. (2009) Evidence of a tick RNAi pathway by comparative genomics and reverse genetics screen of targets with known loss-of-function phenotypes in Drosophila. BMC Molecular Biology, 10 , 26. ISSN 1471-2199 Moolhuijzen, P. M., Lew-Tabor, A. E., Wlodek, B. M., Agüero, F. G., Comerci, D. J., Ugalde, R. A., Sanchez, D. O., Appels, R. and Bellgard, M. (2009) Genomic analysis of Campylobacter fetus subspecies: Identification of candidate virulence determinants and diagnostic assay targets. BMC Microbiology, 9 , 86. ISSN 1471-2180 Morgan, J. A.T., Morris, G.M., Wlodek, B.M., Byrnes, R., Jenner, M., Constantinoiu, C.C., Anderson, G. R., Lew-Tabor, A. E., Molloy, J.B., Gasser, R.B. and Jorgensen, W.K. (2009) Real-time polymerase chain reaction (PCR) assays for the specific detection and quantification of seven Eimeria species that cause coccidiosis in chickens. Molecular and Cellular Probes, 23 (2). pp. 83-89. ISSN 0890-8508 2008Chinivasagam, H.N. and Runge, G. (2008) Food-borne pathogens and animal botulism issues surrounding the on-farm composting of layer chicken waste and mortalities – a review. Technical Report. State of Queensland. Milinovich, G. J., Burrell, P. C., Pollitt, C. C., Bouvet, A. and Trott, D. J. (2008) Streptococcus henryi sp. nov. and Streptococcus caballi sp. nov., isolated from the hindgut of horses with oligofructuose-induced laminitis. International Journal of Systematic and Evolutionary Microbiology, 58 (1). pp. 262-266. ISSN 1466-5034 2007Blackall, P.J., O'Dell, R. and Stephens, C.P. (2007) Minimal inhibitory concentration of tilmicosin against isolates of Histophilus somni from Australian cattle. Australian Veterinary Journal, 85 (12). pp. 503-504. ISSN 0005-0423 Oakey, J. (2007) A universal test to determine the integrity of RNA, and its suitability for reverse transcription, in animal tissue laboratory specimens. Journal of Veterinary Diagnostic Investigation, 19 (5). pp. 459-464. 2006Chen, A.Y., Fry, S.R., Forbes-Faulkner, J., Daggard, G.E. and Mukkur, T.K.S. (2006) Comparative immunogenicity of M. hyopneumoniae NrdF encoded in different expression systems delivered orally via attenuated S. typhimurium aroA in mice. Veterinary Microbiology, 114 (3-4). pp. 252-259. Xu, F., Chen, X., Shi, A., Yang, B., Wang, J., Li, Y., Guo, X., Blackall, P.J. and Yang, H. (2006) Characterization and immunogenicity of an apxIA mutant of Actinobacillus pleuropneumoniae. Veterinary Microbiology, 118 (3-4). pp. 230-239. ISSN 0378-1135 2005Berens, S. J., Brayton, K. A., Molloy, J. B., Bock, R. E., Lew, A. E. and McElwain, T. F. (2005) Merozoite surface antigen 2 proteins of Babesia bovis vaccine breakthrough isolates contain a unique hypervariable region composed of degenerate repeats. Infection and immunity, 73 (11). pp. 7180-7189. ISSN 0019-95671098-5522 Bettelheim, K.A., Kuzevski, A., Gilbert, R. A., Krause, D.O. and McSweeney, C.S. (2005) The diversity of Escherichia coli serotypes and biotypes in cattle faeces. Journal of Applied Microbiology, 98 (3). pp. 699-709. ISSN 1364-5072 Burow, L.C., Gobius, K.S., Vanselow, B.A. and Klieve, A.V. (2005) A lack of predatory interaction between rumen ciliate protozoa and Shiga-toxin producing Escherichia coli. Letters in Applied Microbiology, 40 . pp. 117-122. Cai, X., Chen, H., Blackall, P.J., Yin, Z., Wang, L., Liu, Z. and Jin, M. (2005) Serological characterization of Haemophilus parasuis isolates from China. Veterinary Microbiology, 111 (3-4). pp. 231-236. ISSN 0378-1135 Do, T., Stephens, C., Townsend, K., Wu, X., Chapman, T., Chin, J., McCormick, B., Bara, M. and Trott, D.J. (2005) Rapid identification of virulence genes in enterotoxigenic Escherichia coli isolates associated with diarrhoea in Queensland piggeries. Australian Veterinary Journal, 83 (5). pp. 293-299. ISSN 0005-0423 Klieve, A. V. and Gilbert, R. A. (2005) Bacteriophage populations. In: Methods in Gut Microbial Ecology for Ruminants. Springer. Lancashire, J. F., Terry, T. D., Blackall, P. J. and Jennings, M. P. (2005) Plasmid-encoded Tet B tetracycline resistance in Haemophilus parasuis. Antimicrobial agents and chemotherapy, 49 (5). pp. 1927-1931. ISSN 0066-48041098-6596 Mahony, T. J., McCarthy, F. M., Gravel, J. L., Corney, B., Young, P. L. and Vilcek, S. (2005) Genetic analysis of bovine viral diarrhoea viruses from Australia. Veterinary Microbiology, 106 (1-2). pp. 1-6. ISSN 0378-1135 Mahony, T. J., McCarthy, F. M., Gravel, J. L. and Young, P. L. (2005) Construction of a Gene Inactivation Library for Bovine herpesvirus 1 Using Infectious Clone Technology. In: DNA viruses: methods and protocols. Methods in Molecular Biology (292). Humana Press. ISBN 978-1-58829-353-4 Ouwerkerk, D., Klieve, A. V., Forster, R.J., Templeton, J. M. and Maguire, A. J. (2005) Characterization of culturable anaerobic bacteria from the forestomach of an eastern grey kangaroo, Macropus giganteus. Letters in Applied Microbiology, 41 (4). pp. 327-333. ISSN 1472-765X Stephens, C. P., Oxberry, S. L., Phillips, N. D., La, T. and Hampson, D. J. (2005) The use of multilocus enzyme electrophoresis to characterise intestinal spirochaetes (Brachyspira spp.) colonising hens in commercial flocks. Veterinary Microbiology, 107 (1-2). pp. 149-157. ISSN 0378-1135 Townsend, K. M., Giang, V. N., Stephens, C., Scott, P. T. and Trott, D. J. (2005) Application of nox-restriction fragment length polymorphism for the differentiation of Brachyspira intestinal spirochetes isolated from pigs and poultry in Australia. Journal of Veterinary Diagnostic Investigation, 17 (2). pp. 103-109. ISSN 1040-6387 2003Bettelheim, K. A., Kuzevski, A., Gilbert, R. A., Krause, D.O. and McSweeney, C. S. (2003) The diversity of Escherichia coli serotypes and biotypes in cattle faeces and the effects of diet-induced changes. In: Microbiology: Art in Science, Joint Meeting of the Australian and New Zealand Societies for Microbiology, 28 September - 2 October 2003, Auckland, New Zealand. Klieve, A.V., Hennessy, D., Ouwerkerk, D., Forster, R.J., Mackie, R.I. and Attwood, G.T. (2003) Establishing populations of Megasphaera elsdenii YE 34 and Butyrivibrio fibrisolvens YE 44 in the rumen of cattle fed high grain diets. Journal of Applied Microbiology, 95 (3). pp. 621-630. 2002Hornitzky, M. A., Vanselow, B. A., Walker, K., Bettelheim, K. A., Corney, B., Gill, P., Bailey, G. and Djordjevic, S. P. (2002) Virulence properties and serotypes of Shiga toxin-producing Escherichia coli from healthy Australian cattle. Applied and environmental microbiology, 68 (12). pp. 6439-6445. ISSN 0099-22401098-5336 Jeston, P.J., Blight, G.W., Anderson, G. R., Molloy, J.B. and Jorgensen, W.K. (2002) Comparison of infectivity of Eimeria tenella oocysts maintained at 4, 12 or 28°C for up to 10 months. Australian Veterinary Journal, 80 (1). pp. 91-92. ISSN 0005-0423 Klieve, A. V., Ouwerkerk, D., Turner, A. and Roberton, R. (2002) The production and storage of a fermentor-grown bacterial culture containing Synergistes jonesii, for protecting cattle against mimosine and 3-hydroxy-4(1H)-pyridone toxicity from feeding on Leucaena leucocephala. Australian Journal of Agricultural Research, 53 (1). pp. 1-5. Lew, A.E., Bock, R.E., Minchin, C. M. and Masaka, S. (2002) A msp1α polymerase chain reaction assay for specific detection and differentiation of Anaplasma marginale isolates. Veterinary Microbiology, 86 (4). pp. 325-335. ISSN 0378-1135 Lew, A.E., Bock, R.E., Minchin, C. M. and Masaka, S. (2002) Erratum to "A msp1 alpha polymerase chain reaction assay for specific detection and differentiation of Anaplasma marginale isolates" [Vet Microbiol. 86 (2002) 325-335]. Veterinary Microbiology, 87 (4). pp. 365-366. ISSN 0378-1135 Lew, A.E., Dluzewski, A.R., Johnson, A.M. and Pinder, J.C. (2002) Myosins of Babesia bovis: molecular characterisation, erythrocyte invasion, and phylogeny. Cell Motility and the Cytoskeleton, 52 (4). pp. 202-220. ISSN 1949-3592 Mackie, R.I., Aminov, R.I., Hu, W., Olsen, M., Klieve, A. V. and Kamagata, Y. (2002) Molecular Ecology of Oscillospira guillermondii - a large, morphologically conspicuous, but uncultured rumen bacterium. Reproduction Nutrition Development, 42 (S1). S7-S8. ISSN 0926-5287 Mackie, R.I., McSweeney, C.S. and Klieve, A. V. (2002) Microbial ecology of the ovine rumen. In: Sheep Nutrition. CSIRO, 385 pages. ISBN 978-0-85199-595-3 Oakey, J., Ellis, J.T. and Gibson, L.F. (2002) The development of random DNA probes specific for Aeromonas salmonicida. Journal of Applied Microbiology, 84 (1). pp. 37-46. ISSN 13645072 Stephens, C. P. and Hampson, D. J. (2002) Experimental infection of broiler breeder hens with the intestinal spirochaete Brachyspira ( Serpulina ) pilosicoli causes reduced egg production. Avian Pathology, 31 (2). pp. 169-175. ISSN 0307-9457 2001Forster, R.J., Klieve, A. V. and Ouwerkerk, D. 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(1990) Proposal of a new serovar and altered nomenclature for Haemophilus paragallinarum in the Kume hemagglutinin scheme. Journal of clinical microbiology, 28 (6). pp. 1185-1187. ISSN 0095-11371098-660X 1989Wagland, B.M., Abeydeera, L.R., Rothwell, T.L.W. and Ouwerkerk, D. (1989) Experimental Haemonchus contortus infections in guinea pigs. International Journal for Parasitology, 19 (3). pp. 301-305. ISSN 00207519 1985Duffield, B.J. and Young, D.A. (1985) Survival of Mycobacterium bovis in defined environmental conditions. Veterinary Microbiology, 10 (2). pp. 193-197. ISSN 0378-1135 1969Elder, J.K. and Hall, W.T.K. (1969) Experimental infection of cattle with Tri trichomonas foetus var. Brisbane. Queensland Journal of Agricultural and Animal Sciences, 26 (4). pp. 671-675. 1964Elder, J. K. (1964) Examination of twelve strains of Tritrichomonas foetus (Riedmuller) isolated in Queensland and the description of a new serotype, T. foetus var. brisbane. 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